Pol Avec
So far we are trying to make it work with kallisto https://github.com/nf-core/scrnaseq/pull/157/files. We are still debugging it but the PoC is more or less ready. We are unsure on what's...
> Regarding 1, the barcodes file contains the actual barcodes list, it looks like this: ``` AAACCTGAGCTAGTGG AAACCTGCATCGACGC ... ``` Concerning the second point, do you know which part is...
> > Regarding 1, the barcodes file contains the actual barcodes list, it looks like this > > yes, so how will you actually know which barcode comes from which...
I got your point. However, I have checked those files and there are two problems with them. 1. The matrix is transposed so it will failed when trying to load...
I think what you mentioned @grst sounds good. We have an idea of how to add the gene symbols and the `--export_mtx` parameter. We will have to look into how...
hello @franz101, currently the biggest issue is to get another data source as intrinio is not free. That would be the main todo now. However, I've moved mostly moved to...
I had interaction disabled. Enabling it, quitting and restarting the app solved the issue.
I had the same issue, would be great to create a PR with a solution
@sanasz91mdev this has been resolved in [this unstructured's pr ](https://github.com/Unstructured-IO/unstructured/pull/739). This issue can be closed.