Jared Simpson

Signal-level algorithms for MinION data

jts

tools for assessing the accuracy of genome assemblies

jts

Simple convertor from bam to FASTQ

jts

Bam Read Index - Extract alignments from a bam file by readname

jts

FM-index representation of a de Bruijn graph

jts

jts

Experimental pipeline for correcting nanopore reads

jts

Code for nanopore paper

jts

Small collection of tools for performing quality control on coronavirus sequencing data and genomes

jts

de novo sequence assembler using string graphs

jts