Jeff L. comments

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                                            Jeff L.

ComBat fails with updated ComBat.R

@kasperdanielhansen any word on this?

Problems with Genenames annotation

Hi We are seeing this too. This appears to be because StringTie only assigns a gene name to a transcript if that exact transcript sequence appears in the GTF file...

Prokaryote Differential Expression: Error loading data into ballgown

I'm looking into this to try to figure it out. Can you give me a few more details on the types of samples you ran through StringTie and what versions...

some feedback

This is a great discussion. Thanks guys!

Can't swipe in desktop version

I think having a button to say save or delete Twitter handle would be great! On Fri, Jun 9, 2017, 5:47 AM Fidel Ramirez wrote: > Thanks for your answer....

Changed cat() to message() so that I may suppressMessage() these call…

I'm happy to make this change, but would need a pull request where there are no conflicts to merge.

group_by() functionality

Do you have an example of a case you'd like to work so I can work from that?

group_by() functionality

No you are definitely right. This would be fun to add. Maybe over the holidays :) I think I just need to write a method for the grouped_df class maybe?