Ian Holmes

i.e. you can allow users X, Y, Z to collaborate on symbol `~sym`

Partially implemented using `execSync` to call [llm](https://github.com/simonw/llm), as of [52aac7a](https://github.com/ihh/graphgram/commit/52aac7a79d0586c709ae6f79b6a4e6ae8176ac67). A better solution would be to call the LLM web API directly; this would require the `Grammar.evolve` method to be...

introduce a new JSON format for this?

yaml-cpp: https://github.com/jbeder/yaml-cpp

Random output, conditioned on input, is implemented as of 5d82cb4 using `--random-encode`. It should now be possible to simulate both e.g. by randomly generating the input (with a suitable automata...

Information size of a weighted graph with N nodes and T transitions, with weights specified to a fixed width of W/lg(10) decimal places, is T(2lg(N) + W) Use something like...

Even if the alignments themselves are ignored (pending #18), the sequence-pairs can be used

Standardize on _E.coli_ test set (for later compatibility w/#33) e.g. use https://pfam.xfam.org/family/ABC2_membrane (a bit long but a large family, try to find a shorter one?)

Do #43 first

It’s not so much that it’s slow, rather that I don’t want to lose state in the browser by relaunching it. So for example if I launch a browser, navigate...