YuYu Lin

Hi, when I run the script in 01-map.ipynb, and I always got this error msg. I have installed snakeviz 0.4.1, any clues? thanks ` FileNotFoundError: [Errno 2] No such file...

Can MethylDackel run for pbat?

4

Hi, I read issue #50. You mentioned there is a branch "pbat" in bwameth patched for it. I was wondering, is it the suggested workflows to analyze the pbat dataset...

Hi, we are working on a BS-Seq benchmarking project and would like to ask your help in tuning the parameters of methylpy. If you can help, please get in touch...

PBAT dataset failed in calling step

3

Hi, I used the config files on UserGuide(includes IHEC_standard.conf and IHEC_PBAT.conf) to run the gemBS on a PBAT datasets. But it failed in the calling step, and I can't tell...

cwl_log.json missing

4

@inutano I finally run the service up, Thanks you. However, after my pipeline ended, I got an empty result like this. (base) yuyulin@benchmark-cwl:~$ .cwlmetrics/bin/cwl-metrics fetch tsv container_id stepname hostname instance_type...

No such file or directory: 'snakeviz'

5

Hi I'm trying to use snakeviz for visualization, but when I use the magics ``` bash % snakeviz glob.glob('*.txt') # in example https://jiffyclub.github.io/snakeviz/ ``` I always got this error msg....

no subcommand mhl

9

Hi I used conda to install Meteor by running 'conda install -c dohlee metheor'. The version that was installed is 0.0.3, but it appears that this version only includes four...