pblat
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icebert
parallelized blat with multi-threads support
Hello I have been unable to successfully install pblat due to some ERROR. I enter the source code directory in terminal and issue the "make" command, the following error message...
Hi, When I use pblat, I always get following errors (both github and biconda version): Bad file descriptor Write error to .psl what's wrong? here is my command line pblat...
in one of the closed issue says the Seg fault issue is fixed on v2.5 but I am still getting it on a 14gb genome: pblat -threads=6 -noHead -fastMap -tileSize=12...
the old version (1.3) give me a error when build it: ` hts.c:92:1: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’ before ‘{’ token { ^ hts.c:125:31: error: expected declaration...
When pblat is compiled with AddressSanitizer, it reports a out-of-bound write buffer overflow error at lib/fa.c:483. ``` ./pblat -threads=1 ./pblat-report/01.fa pblat-report/astral-scopdom-seqres-all-test.fa /tmp/pblat-c.psl ``` ``` ================================================================= ==29050==ERROR: AddressSanitizer: heap-buffer-overflow on address...
Hi, icebert: Thanks for your very nice tool, it helps me a lot. I have multiple sample fasta, and want to use pblat in parallel. Can pblat share memory that...
