Lucas Graybuck

icon company Allen Institute for Immunology icon location Seattle, WA icon location Assistant Investigator at the Allen Institute for Immunology. Building tools for transcriptomics, epigenomics, and data releases.

Results 4 comments of Lucas Graybuck

How to cite scratch.hicat ?

Hi Carmen, I recommend citing Tasic, et al. 2018, which is the first place we published the use of scrattch: https://www.nature.com/articles/s41586-018-0654-5 Tasic, B., Yao, Z., Graybuck, L.T. et al. Shared...

Python Equivalent

BrainRender looks to be a great alternative written in Python. It even allows connectivity and MouseLight data to be rendered along with Allen CCF structures - features I'd like to...

Python Equivalent

Ha! Not sure how i missed that :) Thanks for the additional links, @jefferis . mouselightr looks very nice! I'll add these to the readme to help direct people to...

MouseLight reconstructions

Here's a different page with the SWC spec: http://www.neuronland.org/NLMorphologyConverter/MorphologyFormats/SWC/Spec.html I haven't dug into it yet, but it looks like they may only be available as SWC. Here's the function in...