Yizhou Huang (Peter) comments

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                                            Yizhou Huang (Peter)

Sequence extraction of spite reads and discordants reads

Hi Inigo, You mentioned in #39 that using this command to extract the split reads for each ecDNA: Circle-Map bam2bam -i sorted_circular_dna_candidates.bam -qbam qname.bam -fasta /path/to/hg38.fa -o output.bam But I...