Hao-Ting Wang
Hao-Ting Wang
Closes #3268. - refactor the test file loader to allow adding new major release - add test data for 21.x.x and make sure the correct files are loaded - apply...
Just a side note - while doing some performance benchmark[^1] on all the maskers, I might have found some potentially undesired inverse_transform behaviour... See notes on this commit on my...
> Just wondering: wouldn't it be more handy to give a binary vector with length `n_scans` for `sample_mask` ? _Originally posted by @bthirion in https://github.com/nilearn/nilearn/pull/3193#discussion_r838897961_ I did some archaeology and...
Under the hood, `nilearn.masker.NiftiMasker` uses `nilearn.masking.unmask` to inverse transform the signal to image, and for `nilearn.masker.NiftiLabelMasker` it uses `nilearn.regions.signal_extraction.signals_to_img_labels`. There are some inconsistency on how to handle signal transformed from...
I would like to flesh out an idea that came up in #1167 While working on my project that requires time series extraction from multiple atlases, I started thinking if...
Some of the possibly older multiscale atlas fetcher is slightly inconsistent with how the later implemented ones For example, `nilearn.dataset.fetch_atlas_basc_multiscale_2015` would return all resolutions: https://github.com/nilearn/nilearn/blob/2fd6665664f27dfbf1f10aeeba660adc9b560361/nilearn/datasets/atlas.py#L965-L972 Craddock returns all atlas construction...
This is likely an upstream issue. I am filing it here to track it in case other people run into the same thing. Right now `nilearn.input_data.fmriprep_confounds` is finding the relevant...
The links in the panel on the right are not working. Cannot click on it at all.
**Version: 20.2.3** In my own code I am using a lazy way to find the relevant confound file by replacing the suffix of a bold image from ```sub-_[specifiers]_space-_desc-preproc_bold.nii.gz``` to ```sub-_[specifiers]_desc-confounds_timeseries.tsv```...
### What happened? Not sure if this belongs to fMRIPrep or sMRIPrep. I am processing a subject with invalid T1 file (details in `Additional information`). The job inevitably failed at...