Hao-Ting Wang
Hao-Ting Wang
The reason we didn't catch this behaviour is that when we set the high pass filter cutoff to the regular range recommended in the literature (0.008–0.01Hz), everything performed as it...
@gurraburra have you got some time to look at this again? The most sensible change that I can do is to return the signal immediately if `standardize=False`. After diving to...
We only intend to add the mean back when percent signal change was used as the standardization option but things are certainly falling through some cracks... Please see #4604 I...
I just want to drop this here: https://github.com/nipreps/fmriprep/issues/2936 Doing work on ICA-AROMA might not worth the time invested....
w.r.t general non-aggressive approach: Although I know how "non-aggressive" has been described in the literature and how it works theoretically, it would be good to write down the methods in...
Okay in that case, I think the best way forward is to add an extra option under the ica_aroma parameter. Got a good idea for the name? The following is...
I would say it's only default for limited case, say the one ICA-AROMA variation @tsalo wants to implement. Or we don't even expose this option to the user facing part,...
To implement what taylor wants, we will end up with three ICA-AROMA strategies: 1. `full`: the recommended way in fMRIPrep documentation, known as non-aggressive approach in Pruim 2015 2. `basic`:...
Thanks for raising this issue! Your lab tutorial is a great summary for the github docs! It would be great to update this to the module.
I haven't started working on the code side yet, but can work on a PR and use that as a base of the discussion.