Harshad

> Maybe 1 is done in reverse? If you removed everything other than Mondo IDs the new results should _only_ have rows with Mondo IDs! ~Nope. The new result is...

Fixed! Somehow I ended up with very old versions of `oaklib` and `semsql` which had bugs in the past. It is all sorted now and you you can see the...

Documenting findings here: The Issue that produces an error: - One reason is because the workflow is missing the `prefix` parameter which in this case should be `-p MONDO` but...

Created a similar issue [on my fork](https://github.com/hrshdhgd/mondo/issues/149) and ontobot [ran without errors](https://github.com/hrshdhgd/mondo/actions/runs/5469309216). I have fixed the issue and [this PR](https://github.com/monarch-initiative/mondo/pull/6433) does it for the main branch

OK, so here's my first stab. I split nodes by `node_category` and edges by `subject_category` + `edge_category` + `object_category`. Here's a unit test to run to see what's going on:...

> if (row["score"] > .8): > koza_app.write(a, name="filtered") This is assuming there is a score. How/where is this score calculated? Sorry in advance, I do not follow `string_*` concept. Our...

Sorry .... still confused and pardon my ignorance ... I have a few questions. I may have misunderstood this whole concept. If this is the case: - how does this...

https://github.com/INCATools/ontology-access-kit/pull/679: PR on the way!

The latest version - v0.5.22 should be quicker!

`pH_delta` prefixes are already in the KG: https://github.com/Knowledge-Graph-Hub/kg-microbe/blob/9b8343a5200579e10cfc1703176181d7a302755f/data/transformed/BactoTraits/nodes.tsv#L52-L60 For the other two is there data for them at all? I see just `0` or `None` values. All the prefixes in...