hoyonh

PacBio data variant calling problem with mpileup -- (Illumina and Oxford data runs without problem)

4

My problem is that I am having difficulty obtaining a list of variants using bcftools mpileup and bcftools call with PacBio data. I do not have this problem with data...

show more allele counts in INFO

3

I have enjoyed using Clair3 (clair3-arm64) for examining natural variants at the whole-genome level. However, I've recently noticed some irregularities that likely need correction. Specifically, I have observed a large...