hoppo

braker fails on GeneMark step

1

Hi, I have downloaded the lastest version of Braker3 and GeneMark. I have also ran braker3 with the "test data" and it completed successfully (using protein and RNASeq data). When...

Peregrine fails when you use more than 99 threads

3

Hi, I noticed that if you use more than 99 threads (and hence chunks), then peregrine fails. The responsible code is:- let filename = format!("{}-??-of-??.dat", shmmr_index_file_prefix); Although the code will...

No rule to make target '../external/bdsg//lib/libbdsg.so'

5

Hi, I have tried to build GFAse on linux (Rocky Linux release 8.8) and get the following error:- make[2]: *** No rule to make target '../external/bdsg//lib/libbdsg.so', needed by 'split_connected_components'. Stop....