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error in calculating models
Hi, I'm getting an error while running :
o.ifm <- scde.error.models(counts = cleandata, groups = clusters, n.cores = 1, threshold.segmentation = TRUE, save.crossfit.plots = FALSE, save.model.plots = FALSE, verbose = 1)
cross-fitting cells. Error in tapply(colnames(counts), groups, function(ids) { :" The parameters must be of the same length
but my cleandata and clusters seem to be right :
table(clusters) clusters Neuron Oligodendrocyte aNSC+TAC+NB OPC COP 1021 5365 4789 518 322 Astrocyte 10249 cleandata <- clean.counts(data_29319, min.lib.size=1000, min.reads = 1, min.detected = 1)
Thanks!