Compatibility with Seurat v5 Objects

[afonsoguerra]

Thanks for the software that is very useful for data exploration and hypothesis generation.

I am currently using the docker version, and it gives errors if I try to import a Seurat 5 object. The same data goes in fine as an SCE object. Any plans to add Seurat5 support.

Thanks!

[alexvpickering]

Glad to hear its useful to you @afonsoguerra!

This isn't currently a priority but I will think about it since you ask. In the meantime I would suggest either converting to SCE as you mentioned or casting Assay5 slots as Assay's (see here)

[alexvpickering]

@afonsoguerra - sorry for the large delay. This should work now with either Assay5 or Assay but let me know if you encounter any other issues