chromoscope
chromoscope copied to clipboard
hms-dbmi
Interactive multiscale visualization for structural variation in human genomes
Dear Chromoscope Software Developers, Greetings! I have been utilizing your software and noticed that the reference genome selection seems to be limited to hg19 and hg38. May I inquire if...
Hey there, I hope you are having a great day, and that all is going well on your side! Thank you for creating and maintaining this amazing tool. I just...
I am trying to use the chromoscope package in Jupyter Notebook to load my data and use the genome view. However the view is not loading and the genome is...
 Currently, the border is too close to Gosling View.
after fixing this, we can remove the warning about the browser
Color legends overlap on the circular view.
The same .bam file is used, but different SV calls. Configuration: https://somatic-browser-test.s3.amazonaws.com/configs/cell.line.benchmark.json spanning reads showing in blue: https://chromoscope.bio/?demoIndex=0&domain=1762823513.7501237-1762908325.2498758&external=https://somatic-browser-test.s3.amazonaws.com/configs/cell.line.benchmark.json spanning reads not showing: https://chromoscope.bio/?demoIndex=1&domain=1762838440.1290703-1762893398.8709297&external=https://somatic-browser-test.s3.amazonaws.com/configs/cell.line.benchmark.json
**Required** - [x] Publish a Python package - [ ] Add documentation with a separate sidebar menu (e.g., "Using a Python Package") **If Possible** - [ ] Support rendering individual...