hliu56

ImportError for stardist

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**Describe the bug** Hi, I encounter the ImportError when I import stardist. **To reproduce** I'm running this code:`from stardist import fill_label_holes, relabel_image_stardist, random_label_cmap ` **Data and screenshots** **Environment (please complete...

Hi, in this notebook: https://github.com/NielsRogge/Transformers-Tutorials/blob/master/Nougat/Inference_with_Nougat_to_read_scientific_PDFs.ipynb It only copes with the first page of the pdf file (images[0]), what should we do if you want to generate all text for all...

Hi, Thanks for the beautiful algorithm! I wonder if cPCA can do `pca.inverse_transform()` like in the PCA in scikit-learn. Thank you!

Can Martinize2 working on other molecules besides protein?

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Hi Can Martinize2 produce coarse-grained structures and topologies from the atomistic structure of **fatty acids** (e.g. Decanoic_acid, Decanol...etc)? Or it's only for **protein**?

ALOGPS can't predict fragment

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Hi, I was trying to get the itp file for this molecule: `CCCCCCCCCC[N+](C)(C)C` I run this command: `python -m auto_martini --smi "CCCCCCCCCC[N+](C)(C)C" --mol DTAM --top DTAM.itp` and get this error:...