Jaeyoung Chun

Connection settings for SFTP

1

`passphrase` didn't work for me, rather `phrase` worked for me. Could you verify? Also, is there a way to prompt the user for phrase?

Using iTerm's profile

4

I've already set up a bunch of profiles in iTerm2 (pane name, badge, ssh command, colors, font, and etc.), and would like to reuse this profile by specifying in itermocil's...

Unable to load run_report.yaml

3

``` import yaml with open(os.path.join(path_data, "report/run_report.yaml"), "rt") as fin: report = yaml.load(fin, Loader=yaml.FullLoader) ``` I'm getting this error: ``` while scanning for the next token found character '\t' that cannot...

The document says the default value is 3, but it seems that the tool actually uses `--max-error=2` by default. https://hoohm.github.io/CITE-seq-Count/Running-the-script/#optional

`bam diff` seems to return the reads that look identical between A and B

1

Hi, I have two BAM files that I'd like to compare. Each is about 5.6GB. I expect them to be identical (I'm sort of doing a reproducibility test). When I...

It would be great if `bam diff` returns an exit code (0 for identical, 1 for different) just like the `diff` command does. This will allow us to do something...

First of all, thanks for releasing these precious data for free! It seems that you periodically release new data or update the existing data. It would be really great if...

To make it runnable everywhere

Can't retrieve model ChemGPT-1.2B from the store!

2

### Is there an existing issue for this? - [X] I have searched the existing issues and found nothing ### Bug description I've been trying to use `ChemGPT-1.2B`, but I'm...