higlass-docker
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higlass
Builds a docker container wrapping higlass-server and higlass-client in nginx
Currently, higlass-docker is a single container that contains various components - and another container for redis. It would be better to have a kubernetes configuration for all the components that...
How can you run the hiGlass server on a subpath, e.g. https:///higlass/ There is an option "SITE_URL" and "APP_BASEPATH", but they have no effect.. Background: I want to access higlass...
When opening a HiC map in the top/bottom viewport, it is impossible to modify the colormap to "custom". Thanks for the great job anyway!
I am able to view .mcool files, but not .cool files on my local HiGlass instance. The .cool files are supposedly loading, but no progress observed for hours. The .mcool...
I believe you can find free container scanning which can be added to a repository via github actions. This ticket is to add that for the higlass-docker container so that...
[higlass-docker-scan.html.txt](https://github.com/higlass/higlass-docker/files/9974055/higlass-docker-scan.html.txt) You can find the attached Aqua Scan report - remove the .txt outer extension and open in a browser. Under Vulnerabilities you can see multiple Critical and High issues...
My understanding is when you create a superuser it basically creates a django admin account. For HiGlass this is used to (1) create other users, (2) maintain views, and (3)...
sudo docker run -p 11028:80 -p 11029:11029 -v ~/hg-data:/data -it --device=/dev/fuse --privileged higlass/higlass-docker /bin/bash  root@8719e80cb68c:/data# python /home/higlass/projects/higlass-server/manage.py ingest_tileset --filename /data/output.mcool --filetype cooler --datatype matrix  when I used the...
Hi, I'm trying to add arc tracks with plugin [higlass-arcs](https://higlass.github.io/higlass-arcs/) into my docker higlass-container. But as a beginner in HiGlass, I'm not sure how to install higlass-arcs and use it...
