hengbingao

methylpy single-end-pipeline error

2

Hi, Yupeng, when I run methylpy single-end-pipeline --read-files ${i}_1.fastq.gz --sample fetal_cortex --forward-ref $MYGROUP/genome/hg38/methy_hg38_f --reverse-ref $MYGROUP/genome/hg38/methy_hg38_r --ref-fasta genome/hg38.fa --num-procs 20 --bgzip True, some error were: cutadapt: error: unrecognized arguments: -f and...

Hi, wgbstools is a good tool for DNA methylation data analysis, but I wonder if it could generate single base CG and CH methylation allc files which are compatiable to...