heejongkim

Hi, I just wanted to check if you have made a progress on this? I saw some commits that you add DataParallel lines. Thanks for developing such nice tool for...

Yes. I briefly tested with multiple GPUs and it improved the performance substantially, which helped me quickly try out and settle down at least minimal working parameters for my cases....

Fantastic! I just ran over 1 million particles with D128 with --amp -- lazy --zdim 10 -n 50 --qdim 1024 --qlayers 3 --pdim 1024 --players 3 it took only a...

Here's one PSM entry and please let me know if you have any specific part you want to see: ``` ``` Thanks for the recommendation. I got confused a little...

Oh, Let me quickly search BSA file to produce a small mzid and get back to you.

[17928_BSA_20200804171316.mgf_result.mzid.zip](https://github.com/percolator/percolator/files/5073337/17928_BSA_20200804171316.mgf_result.mzid.zip) hope this is useful.

Thanks. I will try that and get back to you.

With suggestion, I changed the DiMethyl to Dimethyl in the parameter file and reran the MS-GF+. With the following "warning" messages, msgf2pin produced the tab file successfully. ``` PSM: SII_46102_1...

Hi @MatthewThe I just encountered the exact same error with a custom mod. not listed in UNIMOD. Is there a quick way to detour the issue? Thank you.

I would like to follow up no FoldAcc. Right now, I can't even get to the point where the original poster mentioned. I'm getting series of errors such as foldacc/model/modules/utils.py...