gemBS icon indicating copy to clipboard operation
gemBS copied to clipboard

missing `Uniqueness Reads` slot from mapping json ?

Open PoisonAlien opened this issue 6 years ago • 0 comments

Hi Simon, I am trying to parse json files generated by map command but it seems that the Uniqueness Reads information is missing from it. However, they are reported in html file generated from map-report. Is it calculated on the fly while generating html reports ? I have attached a sample files for your reference. files.zip

You can see that Unique Fragments (479609) reported in html is missing in json. Is there any way to get this value ?

Thanks.

PoisonAlien avatar Jan 31 '19 09:01 PoisonAlien