harshk95

Additionally, upon running the mouselight api to fetch the metadata from neurons.py , I get the following error: > Querying MouseLight API... > ... fetched metadata for 1110 neurons in...

Hi Federico, Yes, this is still an issue. It was the case for at least the 5 neurons from the Mouse Light database I looked at. I tried to play...

Hi! Thanks for the prompt reply and looking forward to the update. - So, we have 1p imaging videos from Inscopix that need to be concatenated and then preprocessed. The...

[20210910_113823_preprocess.log](https://github.com/bahanonu/ciatah/files/7153584/20210910_113823_preprocess.log) Here the file! A snippet played in ImageJ, yes. Thanks a lot for your help again

We managed in the end to make it work: 5 iterations with a 4x downsampled video (size 5Gb approx.) managed to be preprocessed on a 512GB RAM computer and the...

Hey, thanks a lot, that would be very helpful! The preprocess steps we currently wish to use are: - median filtering - motion correction with spatial filters - adjusting for...