Hari Sadasivan

> I am not sure if I get your question correctly. What Sigmap does is that it maps the signal chunk by chunk, and once the best mapping is much...

Awesome, thanks a lot.

@haowenz I get the following error when I configure uint32 chunk_size = 100 in line 639 of sigmap.cc, re-compile and run with the options --max-num-chunks 11 --min-num-anchors-output 2 --step-size 1....

@haowenz Thanks for your response. Also, I wanted to trim the beginning of the signal not the end. Because that is where the adapters are. Could you help me with...

@SaurabhKalikar Thanks for the response. This does not solve the issue for me. I am doing a recursive clone from the same command as you have captured. I just verified...

@lh3 , thank you for your very prompt response.The scoring parameters I got after training is as follows: #last -a 8 #last -A 11 #last -b 6 #last -B 3...

@lh3 Kindly give me a heads-up, if you are planning for this or not. If not, I can try and do this now. Would happily welcome any useful pointers or...

@skovaka , I understand the kmer-model issue. However, the event detection that you are re-using from scrappie should work equally well for RNA right since it works for scrappie? What...

@skovaka Thank You for the detailed explanation. I realized this would be the issue after trying to do event detection on RNA myself yesterday. Do you think you could share...