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                                            hariiyer16

Error: The index version file /labs/Resources/MMUL_10/index.salmon/versionInfo.json doesn’t seem to exist. Please try re-building the salmon index.]

Hello kalanir. Were you able t resolve this. I am facing the same problem for some time now. Thank you.

The index version file doesn't seem to exist

Thank you. BTW, file sused for salmon quant (*fq.gz) were not attached because of the large size.

The index version file doesn't seem to exist

Hi Rob, After posting yesterdays message, I generated the vM23 index, and the alignments/quants worked. I had to use mem_free=34G for building index. Is that expected? I will try building...

The index version file doesn't seem to exist

Hi Rob, The cluster behavior/load might explain the indexing behaviour. Will keep you posted as I redo with vM25. Thank you again. Hari