wu hao

icon company shanghai University icon location Shanghai, China

Results 8 comments of wu hao

intersections

I meet the same error

intersections

Have you solved it?

Supply bam or use single end reads?

Hi, I have the same requirement，have you solved it ? Thanks

TypeError: unsupported operand type(s) for +=: 'NoneType' and 'int'

> It seems that the transcript exon position is not correct. At 2024-01-22 08:49:54, "haowBio" ***@***.***> wrote: ribotish predict -b ${bams} -g ${gtf} -f ${fa} -o ${res_dir}/longest_pred.txt -p 40 --longest...

TypeError: unsupported operand type(s) for +=: 'NoneType' and 'int'

> You can rerun use -p 1 (default) to process genes sequentially, and use -v -v to show processed genes. The error gene would be the next after the log...

TypeError: unsupported operand type(s) for +=: 'NoneType' and 'int'

> compare the translation difference between samples Is `translation difference` referring to calculating through DESeq2 by utilizing the ORF inframecount computed from each sample?

如何升级至0.1.22？

chrome的话 直接在管理拓展程序界面有更新的按钮 点一下就好了

Endless running Tombo resuiggle, reached to 100% in resuiggle but doesn't go to next step, generate output files

I encountered the same problem when running with docker. After installing it with conda, it ran normally.