Hang Su

Just for testing and see how this works... Add wdls for whatshap read based phasing and shapeit5 statistical phasing pipeline. Shapeit5_v2 integrate whatshap read-based phasing results as scaffold information in...

Hi, Here is an issue for pipeline ONTProcessBasecall. If the input fastq data are all failed, the ListFastqs task will terminate directly without an error message saying "No valid input...

unitigs with no colors

10

Hi, Thanks for this wonderful tool! I'm writing to ask a question about the color of unitigs. I found about 3% of the unitigs created from Bifrost is of no...

Hi, Thanks for the tool for calling SVs from assemblies. I had an issue when calling variants using SVIM-asm. I followed the instruction in the github to first align a...

How to interprete the output information

7

Hi, I tried the program using the files in the example folder. The output is listed as follows. Is this something expected? How to interprete this output? Thanks, Hang

rust crate libwfa

11

Hi, I was trying to use libwfa for a rust code, but failed to compile. The error message suggests stderr value is not found in the scope of the file...

Hi, I was trying to use good_lp to solve the model in the readme example. However, I had a compiling issues here: ``` linking with `cc` failed: exit status: 1...