cycledash icon indicating copy to clipboard operation
cycledash copied to clipboard

Variant Caller Analysis Dashboard and Data Management System

Results 100 cycledash issues
Sort by recently updated
recently updated
newest added

Interested if people thinks this makes sense, and how much work it would entail. For the pt189 analysis, I'd like to view pileups for an arbitrary set of BAMs (normal...

page: /examine
user validated

Again. ![](http://f.cl.ly/items/1k2w3B1L360q2I2H3V1G/Screen%20Shot%202014-11-20%20at%205.13.34%20PM.png)

enhancement
page: /examine

There should be a header added to the comments column that would enable a user to sort by that column. This way the user can easily find comments made about...

enhancement
CQL
user validated
Phase 2

Comments should work to improve the filtering/machine learning algorithm*. In order to do this, we will need some standardized data that a free-form text field can't give us. Therefore, we...

enhancement
user validated

If a user has no projects, we should show an empty that prompts them to create one. ![empty-state](https://cloud.githubusercontent.com/assets/5685044/8010152/c9d8fd7e-0b7b-11e5-919f-c1187bd8d1f9.png)

UI

e.g. on http://cycledash.demeter.hpc.mssm.edu/runs/354/examine, it would be helpful to sort by `SVLEN`, which is a 1-element array. Even more helpful would be to sort by `ABS(SVLEN[0])`.

just like it does on github issues, google docs and elsewhere

enhancement
page: /examine

The paths to the linked BAMs for a run are displayed on the `/runs` page, but not the `/examine` page. This feels a little odd since the latter is a...

enhancement
page: /examine

Kind of a random idea. Interested if people think it'd make any sense. Possibly this should be filed against pileupjs. IPython + matplotlib etc. is a pretty reasonable place to...

This could be done via `history.replaceState` to avoid building up too much history, just like we do with CQL. - [x] CQL Query - [ ] Selected row - [...

enhancement
page: /examine