halmgren

Hi Kurt, Thanks for your prompt reply. The synthesized b0-image does coregister well with the T1w image, however, the boundaries of the brainstem are much less well-defined compared to the...

Hi, Thanks for your response. I already ran topup separately from the synb0-container using the b02b0.cnf configuration file, but that didn't change much. I will play around with the topup-configurations...