Hansi Weißensteiner
Hansi Weißensteiner
Sorry for the delay, was offline the last days. If you want to use the rsrs - then you need to specify the former tree phylotree17 - as the latest...
Dear Alessio, Can you post or send me the input samples profile? Could be related to heteroplasmic variants issue or related to the samples input range. Is it microarray data?
Ciao Alessio - of course, here's my address - [email protected]
That's interesting, we didn't see that when we made the validations with mtDNA mixtures (lab-based) on the GridION: https://www.frontiersin.org/articles/10.3389/fgene.2022.887644/full could you check the per-base qualities of the data - e.g....
Sorry for the delay - could you try to set the parameter "--contig-name" to the respective name in the fasta reference? Is the reference length equal to 16569 (i.e. length...
Unfortunately also something wrong with the latest Linux version - when running on the console: python eKLIPse.py -in data/test_illumina -ref data/NC_012920.1.gb giving plenty of errors: Input file at line xx:...