Heberto Mayorquin

Results 81 issues of Heberto Mayorquin

In #856 I forgot to scale the timestamps of the spikes correctly. This small PR fixes that by scaling the timestamps of neo (which are usually in seconds) to frames....

In #761 we move the warnings of non standard units to `get_traces`. We achieved this by introducing an extra attribute: https://github.com/SpikeInterface/spikeinterface/blob/486bc67d364745437ebf1ed90bfdef7fae255c1c/spikeinterface/core/baserecording.py#L109-L116 However, as far as I know this attribute (`self.has_non_standards_units`)...

NEO

https://spikeinterface.readthedocs.io/en/latest/supported_formats_and_sorters.html The link above claims that ``CellExplorerSortingExtractor` is supported but I can't find it on the code base.

documentation

Hi, I am looking at the gin data for CedIO and I found the following: ``` from pathlib import Path from neo import CedIO DATA_PATH = Path("/home/heberto/ephy_testing_data/") # Gin data...

## Overview First, my understanding is that when I iterate over a video in the way that the documentation suggests `for frame in container.decode(video=0)` the elements are returned in decoding...

user help

The following code does not throw an error: ```python from pynwb.ophys import PlaneSegmentation, ImagingPlane, Device, OpticalChannel from hdmf.common import VectorData channel = OpticalChannel(name='test', description='test', emission_lambda=1.0) device = Device(name='test', description='test') imaging_plane...

From the discussion here: https://github.com/SpikeInterface/spikeinterface/issues/2573#issuecomment-1995993813 I was kind of recluctanct to add "could indicate a bug on the sorter" as this is a very general function but I guess a...

documentation

While discussing in https://github.com/SpikeInterface/spikeinterface/pull/2175 and https://github.com/SpikeInterface/spikeinterface/pull/2209 and the other PR that is now I realized that we don't have a way of tesing lazy recorders performance. Currently, `generate_sorting` alredy pre-loads...

core
testing

This should only be missing durations as @JoeZiminski volunteer himself to do that. See: https://github.com/SpikeInterface/spikeinterface/issues/2342

enhancement
generators

This is a follow up from #1742, it only allocates opens a memmap pointing to the specific trace and not to the whole file.

core
performance