Heberto Mayorquin
Heberto Mayorquin
@arnabiswas thanks a bunch. Can you paste the code that you used to replicate the error? or you mean you replicated it on the guide?
Thanks a lot, that's enough. This is a busy week for me as we have an event at work but I will look into this as soon as possible.
Yes, I will need more help with the file structure: ```python from pathlib import Path from spikeinterface.extractors import read_tdt folder_location = Path("/home/heberto/data/tdt/512ch") folder_path = folder_location / "dataset_0_single_block" assert folder_path.is_dir() recording...
Ok, I know what is causing the error. I will need to discuss this one with @samuelgarcia, I will push a fix.
Hi, @arnabiswas I finally had time to come back to this. The fix is in python-neo: https://github.com/NeuralEnsemble/python-neo/pull/1650 Could you pull that branch and see if you can extract your data?...
Just a comment, there is documentation for the extension dependency graph but it might not be easily discoverable: https://spikeinterface.readthedocs.io/en/latest/modules/postprocessing.html#extensions-as-analyzerextensions
Do you have data that you can share with us so we can test? For TDT the folder that you are using does not seem to contain the corresponding file....
Closing this, feel free to re-open if there is a pending issue.
Related: https://github.com/NeurodataWithoutBorders/nwb-schema/issues/573
Which plexon data is that? Is it plexon2 or plexon1? Is it wideband? I would just run the sorting directly in the plexon recording as @zm711 suggested.