Rafal Gumienny

icon indicating a website link guma44.github.io

icon company Novartis icon location Basel, CH icon location Scientific Software Engineer at Novartis Institutes for BioMedical Research (NIBR)

Results 3 issues of Rafal Gumienny

Wrong path to stdout and stderr

1 comment

Hi, I am working with version 52. I have cache enabled. When the cache is triggered stdout and stderr are copied to the `shard-0/cacheCopy/execution/stdout` directory. However, in the metadata it...

Detect binaries automatically if they are in the PATH

1 comment

Path to Salmon binary is now hardcoded. It would be better when PISCES would check if salmon is in the PATH eg. like here https://stackoverflow.com/questions/377017/test-if-executable-exists-in-python.

enhancement

Arduino code

3 comment

Hi, thanks for so interesting project. I try to set it up but I could not find any file that shall be run on Arduino. I guess the `arduino.py` will...