Rafal Gumienny
Rafal Gumienny
So this was an issue with python 3 only. I check now if there is anything in the file.
Hi @kmuench, thanks for reporting. Could you give an example? I thought it was solved last time.
Hi, did not think about it but this is a good idea. I'll check if this is easily possible and what files do need to be deleted.
Hi, I also face it i.e. @SavvyShah I can definitely reproduce this bug. https://user-images.githubusercontent.com/7634398/201034866-34448061-6674-43a2-a9e9-5c5369f7fb4f.mov
Did you try to implement your own docker-submit in the config file?
"submit-docker" (sorry for reversal) is one of the configuration option in Cromwell config file. See eg. here how additional volumes are mounted (last section): https://davetang.org/muse/2019/12/24/execute-gatk-workflows-locally. In the same way, you...
By "no option to set" do you mean that is not allowed to do this? Cannot you just add this section? Local is just an example. I have UGE backend...
Ah, OK. This looks like something to add.
Hi, really nice PR. Hopefully it will go into Cromwell soon as we also wait for this feature.
Hi, Thanks! I will ignore for now ;). I will try to modify the code to my needs - looks good and easy to follow.