Gerry Tonkin-Hill

Adds the taxadb python package which helps to locally query the ncbi taxonomy

Hi, I've searched through the issues so hopefully this hasn't been mentioned before. It seems that Prokka run's into problems when a fasta header starts with `>0 `. In this...

Clarification on hierarchical read classification with multiple databases

2

Hi, thanks for creating such a useful tool! Apologies if I've missed this in the documentation. I wanted to clarify how krakenuniq handles multiple databases when run as ``` krakenuniq...

https://guangchuangyu.github.io/2016/11/align-genomic-features-with-phylogenetic-tree/

compatibility with python 3.9

2

Hi, Thanks for the really useful package. I'm running into issues when trying to install pysamstats with python version >=3.9 The main error that seems to print is `error: ‘PyTypeObject’...