Danila

- [ ] Refactor `use_obs` - [ ] Make it available for other methods - [ ] Make it more performant - [ ] GPU interface - [ ] Choose...

Relies on [the latest mofapy2 functionality](https://github.com/bioFAM/mofapy2/pull/12).

Empty tables and nullable

3

Should make it possible to read more files out there as in #14

Following https://github.com/scverse/anndata/issues/1245, it makes sense to allow axis labels in MuData: > axis: Literal[0, 1, 'obs', 'var'] or, when creating an object with both axes shared, > axis: Literal[0, 1,...

Fixes for MuData 0.3 release

1

- [x] Fix nested `MuData` dimensions in `__repr__()` - [x] Fix `.uns` contents for views (#52) - [x] Use `mod-order` attribute in `read_zarr()` (#48) - [x] Avoid sorting `.var_names` in...

Conversion functions between formats

1

Implements `.to_anndata()` and `.to_mudata()` as proposed in #14.

As mentioned in https://github.com/scverse/mudata/issues/13#issuecomment-1359332152, text representation could be updated to better reflect the hierarchy in the object as well as to indicate [axes](https://mudata.readthedocs.io/en/latest/notebooks/axes.html).