Mike Smith
Mike Smith
This is a test
I have the same problem but with the recent version of R: ─ Session info ─────── version R version 4.2.0 (2022-04-22) os Ubuntu 18.04.6 LTS system x86_64, linux-gnu ui RStudio...
The return types for many of the `H5X` are all over the place. In most cases they return the same as the equivalent C function i.e. `0` for success (e.g....
Why does `h5writeAttributes()` need to be given an `H5IdComponent` and can't just work with a file name and path to the dataset/group? This came up in the SIB advances single-cell...
It's not really sensible to allow singleton chunks, but users on the SIB advanced single-cell RNA course found it was crashing. This should be looked into.
When we create a new data type with `H5T_create` or `H5T_copy` e.g. https://github.com/grimbough/rhdf5/blob/74982e942b00594112e36f99b7b2fda819866b26/R/h5create.R#L54 there's no way to keep track of the newly created datatype. We are returned an ID, but...
Hello, I believe I noticed two bugs in rhdf5. I'm using R 3.3.3 on Windows64, 2.18.0 linking to C-library HDF5 1.8.7 1. problem: `h5read(..., bit64conversion='double')` converts int32 columns to double...
It would be good to get the dataset chunk size property via a high-level function. This will potentially help delayed array to pick sensible block sizes.
I'm getting the following error in my Github Actions workflows when using Bioconductor 3.16 e.g. [here](https://github.com/grimbough/biocActionsExamples/actions/runs/3329539630/jobs/5506890568#step:3:336) ``` Error in .install_github(todo, lib = lib, lib.loc = lib.loc, repos = repos, :...
> As a suggestion for biomart, maybe in future versions when making a query it should return a message indicating the genome version that was used. Now that GRCm39 is...