ffn
ffn copied to clipboard
google
Flood-Filling Networks for instance segmentation in 3d volumes.
Hi, I am working on FFN network training for a couple of weeks. However, the inference result is still not ideal. Large neurons are detected properly while many tiny neurons...
Somehow, the website to SNEMI3D is down and I am trying to do a quick test using FFN. Could anyone share the trained weights based on this dataset? Thanks!
I am looking for a way to correctly applying multi-GPU to train and inference. I am now using multi-GPU to inference a large volume data separately. The labels generated by...
Wondering why was the next(batch_it) sess.run was not incorporated in the in the immediately following sess.run in run_training_step() ? https://github.com/google/ffn/blob/3ea523c5475bacc2108df0071a8004f71dfbab65/train.py#L682 https://github.com/google/ffn/blob/3ea523c5475bacc2108df0071a8004f71dfbab65/train.py#L684
I'm trying to train an FFN, and the first 2 steps (partition and build the coordinate file) seem to go fine, but training throws Key Value errors. On further inspection...
I got the following error, when I tried to run FFN training with numpy 1.18: `numpy.AxisError: axis 4 is out of bounds for array of dimension 4` Looks like it...
Hello, I installed ffn and downloaded the sample data without issue. I am trying to train the sample model and got an error. I ran this: > (ffn) user:~/ffn-master$ runffn.sh...
@mjanusz Hi, if I used python2.7 I got the same syntax error with https://github.com/google/ffn/issues/19. And then I transform to python 3.7 I got another new error: def _required(bbox: Optional[BoundingBox]) ->...
Hello, Can someone please explain about the codes corresponding to the steps consensus and agglomeration (as in the nature paper) that follows the inference. https://github.com/google/ffn/blob/master/ffn/inference/consensus.py and https://github.com/google/ffn/blob/master/ffn/inference/resegmentation.py seems to have...
Hi, I am suddenly getting a syntax error when I'm running an FFN inference script with the latest build. I think it originated from this commit: https://github.com/google/ffn/commit/3608a173adfa281e0774ebc79fa2da7d26533608 Here is the...
