Chaoqun Gao comments

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                                            Chaoqun Gao

terminate called after throwing an instance of 'std::runtime_error' what(): Found unexpected delimiter C in fastq/fasta input

> 您运行了什么命令？使用了什么数据？ NGS data mapping to gbz using giraffe: vg giraffe -Z ${out}.giraffe.gbz -m ${out}.min -d ${out}.dist -f ${fq1} -f ${fq2} -t 7 > ${i}.gam

terminate called after throwing an instance of 'std::runtime_error' what(): Found unexpected delimiter C in fastq/fasta input

> 您确定您的 FASTQ_没有_`C`我们期望的 FASTQ 分隔符字符吗？ Should be... fastq.gz file : sed -n l file_1.fq.gz @SRR12827854.1 1/1$ NCCTTGCCAAGCTGGCAATGGTCTTTTTAGGCACCTATCACCGTCGTCTCTTAGAGCCTGATACAGTGA\ AGACAATGCTGACACCTCTGTTTAAGTGCTCCACTGAATACTTTGCCAACAAGACTGGCACACCGTGGG\ AGATTAACGAGC$ +$ #FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFF\ FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF::FFF\ FFFFFFFFFFFF$ @SRR12827854.2 2/1$ NAAAGGAAATACAGATAAATATCTAATGGAGTTCTTGATTAGCCCCAGATATCTGAGTCATAAACCCTC\ CAGATCGCTAATTCAGTAGGTTTATATAAATAGTGCTATCTACTAGGTCATTGCCAGTGATTAATTAAT\ TATGGATGGATC$ +$ #FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF\...