Yanhai Gong
Yanhai Gong
When using pak in Dockerfile, some packages need long time to compile (such as httpuv, sass, etc.), so online build services (such as quay, dockerhub) receive no output for a...
These containers are as follows: markdown=3.4.3,pymdown-extensions=10.0.1 click=8.1.3,biopython=1.81,bedtools=2.31.0 khmer=3.0.0a3,fastx_toolkit=0.0.14 spades=3.15.5,perl-bioperl=1.7.8 gatk=3.8--hdfd78af_11,samtools=1.17,picard=2.19.0 prokka=1.14.6,bedops=2.4.38 bowtie2=2.4.4,samtools=1.17 kraken=1.1.1,krona=2.7.1 augustus=3.5.0--pl5321h700735d_3,tantan=40 checkm-genome=1.2.1,augustus=3.5.0--pl5321h700735d_3,tantan=40,biopython=1.81,typer=0.9.0,numpy=1.25.0,eukcc=2.1.0 checkm-genome=1.2.1,biopython=1.81,typer=0.9.0,numpy=1.25.0,eukcc=2.1.0 samtools=1.17,picard=2.19.0,bedtools=2.31.0,r-magicaxis=2.2 fastp=0.20.1,mccortex=1.0,r-magicaxis=2.2.14,r-rcolorbrewer=1.1_3 opentsne=1.0.0,h5py=3.9.0,numpy=1.25.0,pandas=2.0.2,kpal=2.1.1,perl-bioperl=1.7.8 numpy=1.25.0,scipy=1.10.1,pysam=0.21.0,samtools=1.17 preseq=3.2.0,r-base=4.3.0 kofamscan=1.3.0,python=3.6.10 kraken2=2.1.2,krona=2.7.1