Charity Goeckeritz

Hi Arang, Thanks for the quick response! For anyone else trying to do this --- don't forget to specify the spectra-cn.hist file with -f and the output prefix for your...

Ah, good catch! Thanks Arang!!!

Hi there, I actually am looking to do this same thing as ghost and ramadatta, but I'm not sure what examples you're referring to in https://github.com/YuLab-SMU/plotting-tree-with-data-using-ggtreeExtra ?

Anyone have luck on this issue? I'm also having this problem -- installed it via conda: conda install -c "bioconda/label/cf201901" lumpy-sv But had to load Sambamba and samblaster separately on...

Hi baoxingsong, Cool tool, thanks for making this!! I have this same issue peterdfields is describing, and I've named the chromsomes in the same way. Here are the first lines...

Hi, I hit a similar issue when trying to install with bioconda in a conda environment. Was this ever solved?

Hi @lucventurini, Thanks so much for the quick response. Our operating system is CentOS 7. My sequence of commands was conda create -n portcullis conda install portcullis --channel=bioconda Then when...

Perfect, thanks a bunch!

Gotcha. Mostly I just think it would need to be able to make more than 2 calls per site. Is there a way to keep multi-mappers (reads containing the XA...

Hi all, Was there a solution to this? I also seem to have a similar problem... did a reinstall eventually work? It took a while to install EDTA for me...