gmarcais

I am not sure I understand what the error is. If you work from the git tree, you must have SWIG (version 3 or higher) installed to compile the script...

Perl defines a lot of constants which have the potential to interact badly with other piece of software, in particular the C++ standard library. The documentation advised to use GCC...

This is a good point, but here is my dilemma. If you get Jellyfish from github, then you need yaggo to generate the *_cmdline.hpp files. On the other hand, if...

Well, under the Installation section, the text says: > To get an easier to compiled packaged tar ball of the source code, download a release from home page of Jellyfish...

Hi Ram, the big.sh test is sadly not run very often. I would not be surprised if it accumulated bit rot. Given that all the other tests pass, (as they...

Thanks. On Mon, May 12, 2014 at 9:55 AM, fplaza [email protected] wrote: > --- > > You can merge this Pull Request by running > > git pull https://github.com/fplaza/Jellyfish patch-1...

Thanks. Pulled in my develop branch. On Thu, May 8, 2014 at 6:23 PM, Astrid Deschenes [email protected]: > ## Typo correction. > > You can merge this Pull Request by...

I don't have a great handle on the code yet, but precomputing the regex object as Rob suggested is essential.

Can you give us the regular expression that are generated and used for matching?

Does it make sense to have '^' and/or '$' around the regex? Having anchors usually speeds up a regex. Otherwise, I am not sure. Have we tested other libraries than...