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globaldothealth
Repository for Global.health: a data science initiative to enable rapid sharing of trusted and open public health data to advance the response to infectious diseases.
https://docs.ogc.org/is/17-003r2/17-003r2.html This doesn't imply changing our schema, we can add a JSON-LD context that maps our schema onto the metadata standard. But it would make it easy for users to...
We know that running on AWS + mongodb Atlas at around the 100M case level is costing us ~$1400/mo for mongodb and ~$1600/mo for AWS. Can we do a table...
**Is your feature request related to a problem? Please describe.** Currently all data is in one `cases` collection. This causes issues with operations such as prune, which have to get...
View your issue at Applause Testing Services - https://platform.applause.com/products/999/testcycles/888/issues/777 ---- ACTION DETAILS ---- Action Performed: 1. Action performed will be placed in here. 2. Click something Expected Result: Expected result...
Data dictionary should: - be available in some machine-readable format (maybe an XML schema definition or something) - describe/link to standard formats for fields where they are used (e.g. ISO...
**Is your feature request related to a problem? Please describe.** Much of the ingestion code that we currently have is repetitive, particularly around basic location handling, age parsing and date...
Automated data ingestion is around an order of magnitude slower than it could be: importing all the US data into mongodb atlas should take ~12h but ingesting takes nearly two...
**Is your feature request related to a problem? Please describe.** Some data sets are spread accross multiple files (https://github.com/globaldothealth/list/issues/518 has an example): a file containing case data and a file...
@Mougk and I have discussed this, should definitely have some public-facing page about how we deal with it. Prerequisites: #2185 #2499 #2548 #1637 #2203 #2550 [FAIR principles described here](https://www.nature.com/articles/sdata201618)
Once we've got an API we're happy with and have addressed user feedback, we need to "stabilise" it and publish it as a versioned API endpoint so that new development...
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Repository for Global.health: a data science initiative to enable rapid sharing of trusted and open public health data to advance the response to infectious diseases.