Guillaume Delevoye

Thank you very much @wyhinton for you answer :) So, if I understand well, I could use Speedy2D with, say, egui for instance (https://github.com/emilk/egui), is that right ? Do you...

Ok ! I think it's much clearer now I'll give a try like this, and maybe I'll come back to you if I have other questions but it looks like...

Hello, While this is just a workaround, remark that [bedtools bamtobed](https://bedtools.readthedocs.io/en/latest/content/tools/bamtobed.html) can be used to turn a .bam into a .bed file which, in turn, is handled correctly by pyGenomeTracks....

I agree, I thought the same a few days ago. This would really be a killer feature. But this is indeed very ambitious

Same problem for me. Updating numpy did not solve the problem Copy-paste the above snippet did not work either, but maybe this time it was due to pathologic p-values in...

In Ubuntu 22.04 LTS the following worked for me : ``` deb [arch-=i386 signed-by=/usr/share/keyrings/mono-official-archive-keyring.gpg] https://download.mono-project.com/repo/ubuntu stable-focal main ```

The exact same problem is still there for me with ipykernel 5.1.2 Additionnal remarks for me: - Some notebooks work perfectly fine when using "run everything" but don't when running...

Hello @clarepacini Sometimes in academics, research projects take lots of time, so maybe even in 2021 you could still give a look to a small repackaging I did a while...

Quick suggestion here: The standard deviation can only be computed if coverage >= 3

Hi, I'm not from PacBio and this question is from ~6 months ago, but in case it is still not solved for you, maybe you can download directly the ipdSummary...