Ivan Anishchenko

icon indicating a website link https://www.bakerlab.org/

icon company Institute for Protein Design, UW icon location Seattle, WA icon location protein structure prediction, computational biology

Results 12 comments of Ivan Anishchenko

pick_final_models.div.py references Robetta

`crop="discont" ` works better for big proteins and is a bit more accurate at recapitulating domain-domain interactions compared to `crop="cont"`. The latter on the other hand gives a bit more...

pick_final_models.div.py references Robetta

Yeah, we are also having same issues with long proteins. An easy workaround is to run trRefine on a cpu by modifying line #131 of the `run_pipeline.sh` script to: ```...