mapDamage

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When using the --rescale option, in what range do the new quality scores lie in the case of a probable ancient damage? Or, more specifically, if I call SNPs on...

margeti

CHR field misincorporation.txt

3

Hi, I noticed that the CHR field has been removed from the misincorporation.txt file. I was using it to plot damage patterns for the first few bases for each BAM...

MeriamGuellil

Plot_composition_2

2

Hello, sorry for asking one more time, i've written in previouse topic but it was closed. https://github.com/ginolhac/mapDamage/issues/33 I've tried mapdamage tool alone and as the part of Paleomix tools and...

valery-shap

Hi, I have been using an older version. I updated recently and I noticed that the aforementioned tables are missing. Can you confirm that this is by design and not...

npsonis

Hello, I am trying to filter ancient whole genome data using the --rescale option with mapDamage2. All the plotting output files are generated fine, however an error appears for the...

rogeorg2