Konstantinos Gidiotis

Hi everyone, I've run into a similar issue with this thread as well. So in my case I used minimap2(v2.26) and bwa, but also I wanted to mark and remove...

Hi @weirdo-onlooker, I am facing the same problem using SLURM, did you manage to solve the problem? **"Wrote 48415 instead of 146868 objects of type ubyte to file `/tmp/sambamba-pid17362-markdup-nirv/PairedEndsInfotopn4' (No...

Hi @this-is-Mayank , I am dealing with the same error. I found out a solved thread #176 which apparently solves the problems using thread #178. However, I do not understand...

Hi @its-me-Mayank , Thanks for your immediate reply. I don't know if it is possible for you and share your steps regarding this issue. I notice that I have a...

Hi @its-me-Mayank , Thank you for help on this. So I also figured out the problem with the vg dependencies by install it using conda. In general, I had many...

Thank you for your reply Shujun, I managed to overcome the `Sequence Error `by using only one library each time. My original library was a merged dataset combining a classified...