George Carvalho

Hi @nacasfer, did you solve this issue? I'm dealing with something similar. Regards.

[drop_test.zip](https://github.com/gagneurlab/drop/files/13354268/drop_test.zip) Hi @vyepez88, can you check it out, please?

Sorry! [drop_test.zip](https://github.com/gagneurlab/drop/files/13443037/drop_test.zip)

Hi @vyepez88, just having the same issue here trying to run the `drop demo` data: ```bash (drop_env) root@ip-10-34-87-44:/var/snap/amazon-ssm-agent/7993/drop_demo# drop --version drop, version 1.4.0 (drop_env) root@ip-10-34-87-44:/var/snap/amazon-ssm-agent/7993/drop_demo# snakemake --cores 20 ... [Sat...

Hey @vyepez88, tried today and I'm having the same error: ```bash [Tue Jun 25 00:22:37 2024] Finished job 76. 140 of 196 steps (71%) done Select jobs to execute... Error...

Hi @vyepez88, I was able to run the outrider module using my data but I am having issues with the Fraser2 module: ```bash [Thu Jul 4 02:29:51 2024] Finished job...

All of them failed, what do you mean by computational setup? ```bash (base) root@ip-10-34-87-23:/var/snap/amazon-ssm-agent/7993# lscpu Architecture: x86_64 CPU op-mode(s): 32-bit, 64-bit Address sizes: 46 bits physical, 48 bits virtual Byte...

Nop, had the issues with the NCBI error from before.

I think the reason is similar to the [FRASER issue 50](https://github.com/gagneurlab/FRASER/issues/50), I am using an AWS environment with similar connectivity security.

Hi @vyepez88, I'm able to have FRASER running outside of DROP. I was trying to create the `exportCounts` to have the `GENE_COUNTS_FILE` to reuse but I have this connective issue...