go-annotation

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cyclosporin A binding PTN008511653

2

* **PTHR ID & PTN node:** I have a few annotations for cyclosporin A binding from lots of sources. It seems odd since cyclosporin is a compound isolated from soil...

ValWood

Review annotations to GO:1903562 microtubule bundle formation involved in mitotic spindle midzone assembly

10

Dear all, The proposal has been made to obsolete GO:1903562 microtubule bundle formation involved in mitotic spindle midzone assembly see https://github.com/geneontology/go-ontology/issues/24046 Impacted groups: PomBase 2 (done) WB 1 (done) FlyBase...

ValWood

See https://github.com/geneontology/go-ontology/issues/27105 GO:0016267 O-glycan processing, core 1 GO:0016268 O-glycan processing, core 2 GO:0016269 O-glycan processing, core 3 GO:0016270 O-glycan processing, core 4 GO:0031041 O-glycan processing, core 5 GO:0031042 O-glycan processing,...

pgaudet

Re-run check of Wnt pathway involved in x

4

To replace old ticket #4800 ~GO:1904886 | beta-catenin destruction complex disassembly~ GO:2000041 | negative regulation of planar cell polarity pathway involved in axis elongation GO:2000151 | negative regulation of planar...

pgaudet

Review annotations to glucuronoside metabolic/biosynthetic/catabolic/ process

7

Dear all, The proposal has been made to obsolete GO:0019389 glucuronoside metabolic process GO:0019390 glucuronoside biosynthetic process GO:0019391 glucuronoside catabolic process see https://github.com/geneontology/go-ontology/issues/28506. The biosynthetic and catabolic processes are MF's....

raymond91125

Update gpad-gpi-2-0.md

2

@balhoff I *think* I made the changes in https://github.com/geneontology/go-annotation/issues/4881 about slashes in local ID and the relation list. I'm not sure how to accomplish > allow other properties but require...

suzialeksander

Check annotations to GO:0070269 pyroptosis

4

GO:0070269 pyroptosis

pgaudet

Review annotations to GO:0030970 retrograde protein transport, ER to cytosol & children

2

For #https://github.com/geneontology/go-ontology/issues/21269 GO:0030970 retrograde protein transport, ER to cytosol GO:1904211 membrane protein proteolysis involved in retrograde protein transport, ER to cytosol GO:1904153 negative regulation of retrograde protein transport, ER to...

pgaudet

Review annotations to GO:0052665 tRNA (uracil-2'-O-)-methyltransferase activity

8

The proposal has been made to obsolete GO:0052665 tRNA (uracil-2'-O-)-methyltransferase activity Annotations are here: https://docs.google.com/spreadsheets/d/1Oh1E8Xa36Gj6ZYltz9SBebiO2CF6-zFBeaY8ox2UmZU/edit#gid=0

pgaudet

Review annotations to GO:0060465 pharynx development & GO:0043282 pharyngeal muscle development

8

Dear all, The proposal has been made to obsolete GO:0060465 pharynx development and rename GO:0043282 pharyngeal muscle development to chordate pharyngeal muscle development. see https://github.com/geneontology/go-ontology/issues/18285 Existing annotations should be moved...

raymond91125