Gabriel A. Devenyi

icon indicating a website link https://gabriel.devenyi.ca icon indicating an email [email protected]

icon company Cerebral Imaging Center, Douglas Mental Health University Institute, @CobraLab icon location Montreal, Quebec, Canada icon location Research Computing Associate at Cerebral Imaging Centre, Douglas Mental Health University Institute, McGill University

Results 662 comments of Gabriel A. Devenyi

Package for Ubuntu 24.04

Considering the style of all-in-one build of freesurfer, I would suggest switching to an apptainer built from the docker release.

Parameter tuning for images with gaps between brain regions.

Using larger-than-usually-sensible gradient step size for the SyN step can allow for strong warping to improve this. Reducing the SyN regularisation can also help here.